NRBP2 protein (Colobus angolensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

NRBP2

Nuclear receptor binding protein 2. (458 aa)

Predicted Functional Partners:

TSC22D4

0.700

PYCR3

0.551

SRFBP1

0.539

LONP2

0.538

ENSCANP00000028625

0.524

PARP10

0.511

EXOSC4

0.493

TSC22D3

0.485

TSC22D1

0.485

TSC22D2

0.485

Your Current Organism:

Colobus angolensis

NCBI taxonomy Id: 336983
Other names: C. angolensis palliatus, Colobus angolensis palliatus

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCANP00000028625	NRBP2	ENSCANP00000028625	ENSCANP00000001305	Uncharacterized protein.	Nuclear receptor binding protein 2.	0.524
EXOSC4	NRBP2	ENSCANP00000024670	ENSCANP00000001305	Exosome component 4.	Nuclear receptor binding protein 2.	0.493
EXOSC4	PYCR3	ENSCANP00000024670	ENSCANP00000005551	Exosome component 4.	Pyrroline-5-carboxylate reductase; Belongs to the pyrroline-5-carboxylate reductase family.	0.608
LONP2	NRBP2	ENSCANP00000011651	ENSCANP00000001305	Lon protease homolog 2, peroxisomal; ATP-dependent serine protease that mediates the selective degradation of misfolded and unassembled polypeptides in the peroxisomal matrix. Necessary for type 2 peroxisome targeting signal (PTS2)-containing protein processing and facilitates peroxisome matrix protein import. May indirectly regulate peroxisomal fatty acid beta- oxidation through degradation of the self-processed forms of TYSND1.	Nuclear receptor binding protein 2.	0.538
LONP2	SRFBP1	ENSCANP00000011651	ENSCANP00000035233	Lon protease homolog 2, peroxisomal; ATP-dependent serine protease that mediates the selective degradation of misfolded and unassembled polypeptides in the peroxisomal matrix. Necessary for type 2 peroxisome targeting signal (PTS2)-containing protein processing and facilitates peroxisome matrix protein import. May indirectly regulate peroxisomal fatty acid beta- oxidation through degradation of the self-processed forms of TYSND1.	Serum response factor binding protein 1.	0.554
NRBP2	ENSCANP00000028625	ENSCANP00000001305	ENSCANP00000028625	Nuclear receptor binding protein 2.	Uncharacterized protein.	0.524
NRBP2	EXOSC4	ENSCANP00000001305	ENSCANP00000024670	Nuclear receptor binding protein 2.	Exosome component 4.	0.493
NRBP2	LONP2	ENSCANP00000001305	ENSCANP00000011651	Nuclear receptor binding protein 2.	Lon protease homolog 2, peroxisomal; ATP-dependent serine protease that mediates the selective degradation of misfolded and unassembled polypeptides in the peroxisomal matrix. Necessary for type 2 peroxisome targeting signal (PTS2)-containing protein processing and facilitates peroxisome matrix protein import. May indirectly regulate peroxisomal fatty acid beta- oxidation through degradation of the self-processed forms of TYSND1.	0.538
NRBP2	PARP10	ENSCANP00000001305	ENSCANP00000039768	Nuclear receptor binding protein 2.	Poly [ADP-ribose] polymerase.	0.511
NRBP2	PYCR3	ENSCANP00000001305	ENSCANP00000005551	Nuclear receptor binding protein 2.	Pyrroline-5-carboxylate reductase; Belongs to the pyrroline-5-carboxylate reductase family.	0.551
NRBP2	SRFBP1	ENSCANP00000001305	ENSCANP00000035233	Nuclear receptor binding protein 2.	Serum response factor binding protein 1.	0.539
NRBP2	TSC22D1	ENSCANP00000001305	ENSCANP00000031031	Nuclear receptor binding protein 2.	TSC22 domain family member 1.	0.485
NRBP2	TSC22D2	ENSCANP00000001305	ENSCANP00000031837	Nuclear receptor binding protein 2.	TSC22 domain family member 2.	0.485
NRBP2	TSC22D3	ENSCANP00000001305	ENSCANP00000009888	Nuclear receptor binding protein 2.	TSC22 domain family member 3.	0.485
NRBP2	TSC22D4	ENSCANP00000001305	ENSCANP00000015825	Nuclear receptor binding protein 2.	TSC22 domain family member 4.	0.700
PARP10	NRBP2	ENSCANP00000039768	ENSCANP00000001305	Poly [ADP-ribose] polymerase.	Nuclear receptor binding protein 2.	0.511
PYCR3	EXOSC4	ENSCANP00000005551	ENSCANP00000024670	Pyrroline-5-carboxylate reductase; Belongs to the pyrroline-5-carboxylate reductase family.	Exosome component 4.	0.608
PYCR3	NRBP2	ENSCANP00000005551	ENSCANP00000001305	Pyrroline-5-carboxylate reductase; Belongs to the pyrroline-5-carboxylate reductase family.	Nuclear receptor binding protein 2.	0.551
SRFBP1	LONP2	ENSCANP00000035233	ENSCANP00000011651	Serum response factor binding protein 1.	Lon protease homolog 2, peroxisomal; ATP-dependent serine protease that mediates the selective degradation of misfolded and unassembled polypeptides in the peroxisomal matrix. Necessary for type 2 peroxisome targeting signal (PTS2)-containing protein processing and facilitates peroxisome matrix protein import. May indirectly regulate peroxisomal fatty acid beta- oxidation through degradation of the self-processed forms of TYSND1.	0.554
SRFBP1	NRBP2	ENSCANP00000035233	ENSCANP00000001305	Serum response factor binding protein 1.	Nuclear receptor binding protein 2.	0.539