STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TEX13ATestis expressed 13A. (410 aa)    
Predicted Functional Partners:
UTP4
UTP4 small subunit processome component.
   
  
 0.668
WDR36
WD repeat domain 36.
   
    0.624
PWP2
Uncharacterized protein.
   
    0.623
PUM3
Pumilio RNA binding family member 3.
   
    0.619
UTP25
UTP25 small subunit processor component.
   
    0.618
TBL3
Transducin beta like 3.
   
    0.609
WDR3
WD repeat domain 3.
   
    0.609
BTG3
BTG anti-proliferation factor 3.
    
   0.600
FTSJ3
pre-rRNA processing protein FTSJ3; Probable methyltransferase involved in the processing of the 34S pre-rRNA to 18S rRNA and in 40S ribosomal subunit formation. Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily.
   
    0.549
AMDHD2
Amidohydrolase domain containing 2.
      
 0.527
Your Current Organism:
Colobus angolensis
NCBI taxonomy Id: 336983
Other names: C. angolensis palliatus, Colobus angolensis palliatus
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