Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FIP1L1Factor interacting with PAPOLA and CPSF1. (594 aa)    
Predicted Functional Partners:
CPSF3
Cleavage and polyadenylation specific factor 3.
   
 0.999
CPSF1
Cleavage and polyadenylation specific factor 1.
   
 0.998
WDR33
WD repeat domain 33.
   
 0.998
CPSF2
Cleavage and polyadenylation specificity factor subunit 2.
    
 0.998
CPSF4
Cleavage and polyadenylation specific factor 4.
    
 0.996
CPSF4L
Cleavage and polyadenylation specific factor 4 like.
    
 0.990
SYMPK
Symplekin.
   
 0.989
PCF11
PCF11 cleavage and polyadenylation factor subunit.
    
 0.979
CSTF3
Cleavage stimulation factor subunit 3.
   
 0.977
CSTF1
Cleavage stimulation factor subunit 1.
    
 0.970
Your Current Organism:
Colobus angolensis
NCBI taxonomy Id: 336983
Other names: C. angolensis palliatus, Colobus angolensis palliatus
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