STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CNTN6Contactin 6. (1028 aa)    
Predicted Functional Partners:
PTPRG
Protein tyrosine phosphatase receptor type G.
    
 0.911
CHL1
Cell adhesion molecule L1 like.
    
0.826
NRCAM
Neuronal cell adhesion molecule.
    
0.759
APP
Amyloid beta precursor protein.
   
 
 0.735
L1CAM
L1 cell adhesion molecule.
    
0.709
NFASC
Neurofascin.
   
0.671
APLP2
Amyloid beta precursor like protein 2.
   
 
 0.588
APLP1
Amyloid beta precursor like protein 1.
   
 
 0.561
PTPRZ1
Protein tyrosine phosphatase receptor type Z1.
   
 0.556
VPS53
VPS53 subunit of GARP complex.
      
 0.523
Your Current Organism:
Colobus angolensis
NCBI taxonomy Id: 336983
Other names: C. angolensis palliatus, Colobus angolensis palliatus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.