STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NAIF1Nuclear apoptosis inducing factor 1. (327 aa)    
Predicted Functional Partners:
INTS3
Integrator complex subunit 3.
    
   0.913
INTS5
Integrator complex subunit 5.
    
   0.913
ENSCANP00000029120
INT_SG_DDX_CT_C domain-containing protein.
    
   0.881
INTS6
Integrator complex subunit 6.
    
   0.881
VAMP7
Vesicle associated membrane protein 7; Belongs to the synaptobrevin family.
   
 0.863
NSF
N-ethylmaleimide sensitive factor, vesicle fusing ATPase.
   
 0.861
ENSCANP00000020160
Longin domain-containing protein; Belongs to the synaptobrevin family.
   
 0.842
YKT6
YKT6 v-SNARE homolog; Belongs to the synaptobrevin family.
   
 0.842
VPS16
Vacuolar protein sorting-associated protein 16 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes. Belongs to the VPS16 family.
    
 
 0.841
VPS41
Vacuolar protein sorting-associated protein 41 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport pathways; Belongs to the VPS41 family.
    
 
 0.831
Your Current Organism:
Colobus angolensis
NCBI taxonomy Id: 336983
Other names: C. angolensis palliatus, Colobus angolensis palliatus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.