KLHL41 protein (Colobus angolensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

KLHL41

Kelch like family member 41. (606 aa)

Predicted Functional Partners:

BBS1

0.962

BBS9

0.956

TTC8

0.943

BBS7

0.937

BBS2

0.931

BBS4

0.916

NEB

0.854

MYLPF

0.795

LZTFL1

0.786

CKM

0.784

Your Current Organism:

Colobus angolensis

NCBI taxonomy Id: 336983
Other names: C. angolensis palliatus, Colobus angolensis palliatus

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BBS1	BBS2	ENSCANP00000040143	ENSCANP00000034364	BBS1 domain-containing protein.	Bardet-Biedl syndrome 2 protein homolog.	0.992
BBS1	BBS4	ENSCANP00000040143	ENSCANP00000030802	BBS1 domain-containing protein.	Bardet-Biedl syndrome 4.	0.993
BBS1	BBS7	ENSCANP00000040143	ENSCANP00000005589	BBS1 domain-containing protein.	Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function.	0.991
BBS1	BBS9	ENSCANP00000040143	ENSCANP00000007748	BBS1 domain-containing protein.	Bardet-Biedl syndrome 9.	0.993
BBS1	KLHL41	ENSCANP00000040143	ENSCANP00000003576	BBS1 domain-containing protein.	Kelch like family member 41.	0.962
BBS1	LZTFL1	ENSCANP00000040143	ENSCANP00000028969	BBS1 domain-containing protein.	Leucine zipper transcription factor like 1.	0.914
BBS1	TTC8	ENSCANP00000040143	ENSCANP00000025862	BBS1 domain-containing protein.	Tetratricopeptide repeat domain 8.	0.993
BBS2	BBS1	ENSCANP00000034364	ENSCANP00000040143	Bardet-Biedl syndrome 2 protein homolog.	BBS1 domain-containing protein.	0.992
BBS2	BBS4	ENSCANP00000034364	ENSCANP00000030802	Bardet-Biedl syndrome 2 protein homolog.	Bardet-Biedl syndrome 4.	0.996
BBS2	BBS7	ENSCANP00000034364	ENSCANP00000005589	Bardet-Biedl syndrome 2 protein homolog.	Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function.	0.997
BBS2	BBS9	ENSCANP00000034364	ENSCANP00000007748	Bardet-Biedl syndrome 2 protein homolog.	Bardet-Biedl syndrome 9.	0.997
BBS2	KLHL41	ENSCANP00000034364	ENSCANP00000003576	Bardet-Biedl syndrome 2 protein homolog.	Kelch like family member 41.	0.931
BBS2	LZTFL1	ENSCANP00000034364	ENSCANP00000028969	Bardet-Biedl syndrome 2 protein homolog.	Leucine zipper transcription factor like 1.	0.956
BBS2	TTC8	ENSCANP00000034364	ENSCANP00000025862	Bardet-Biedl syndrome 2 protein homolog.	Tetratricopeptide repeat domain 8.	0.993
BBS4	BBS1	ENSCANP00000030802	ENSCANP00000040143	Bardet-Biedl syndrome 4.	BBS1 domain-containing protein.	0.993
BBS4	BBS2	ENSCANP00000030802	ENSCANP00000034364	Bardet-Biedl syndrome 4.	Bardet-Biedl syndrome 2 protein homolog.	0.996
BBS4	BBS7	ENSCANP00000030802	ENSCANP00000005589	Bardet-Biedl syndrome 4.	Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function.	0.995
BBS4	BBS9	ENSCANP00000030802	ENSCANP00000007748	Bardet-Biedl syndrome 4.	Bardet-Biedl syndrome 9.	0.997
BBS4	KLHL41	ENSCANP00000030802	ENSCANP00000003576	Bardet-Biedl syndrome 4.	Kelch like family member 41.	0.916
BBS4	LZTFL1	ENSCANP00000030802	ENSCANP00000028969	Bardet-Biedl syndrome 4.	Leucine zipper transcription factor like 1.	0.921