STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APODApolipoprotein D. (175 aa)    
Predicted Functional Partners:
APOA2
Apolipoprotein A2.
   
 
 0.701
LCN1
Lipocalin 1; Belongs to the calycin superfamily. Lipocalin family.
     
 0.624
C8G
Complement C8 gamma chain; Belongs to the calycin superfamily. Lipocalin family.
     
 0.605
SAMM50
SAMM50 sorting and assembly machinery component.
      
 0.569
APOE
Apolipoprotein E.
   
  
 0.564
CLU
Clusterin.
   
  
 0.555
APOB
Apolipoprotein B.
   
  
 0.528
LCAT
Lecithin-cholesterol acyltransferase.
   
  
 0.521
TTR
Transthyretin; Thyroid hormone-binding protein. Probably transports thyroxine from the bloodstream to the brain.
   
 
 0.517
LCN9
Lipocalin 9; Belongs to the calycin superfamily. Lipocalin family.
     
 0.516
Your Current Organism:
Colobus angolensis
NCBI taxonomy Id: 336983
Other names: C. angolensis palliatus, Colobus angolensis palliatus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.