STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPEGNBSPEG neighbor. (238 aa)    
Predicted Functional Partners:
TCAP
Titin-cap.
   
 0.966
ACTN2
Actinin alpha 2.
   
 0.940
MYL1
Myosin light chain 1.
   
 0.846
TRIM63
Tripartite motif containing 63.
   
 
 0.831
CALML6
Calmodulin like 6.
  
 
 0.792
NEB
Nebulin.
   
 0.791
OBSCN
Obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF.
   
 
0.762
OBSL1
Obscurin like 1.
   
 
0.762
MYLPF
Myosin light chain, phosphorylatable, fast skeletal muscle.
   
 0.741
WDR18
WD repeat domain 18.
   
 0.729
Your Current Organism:
Colobus angolensis
NCBI taxonomy Id: 336983
Other names: C. angolensis palliatus, Colobus angolensis palliatus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.