STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LMNB2Lamin B2; Belongs to the intermediate filament family. (582 aa)    
Predicted Functional Partners:
LMNB1
Lamin B1; Belongs to the intermediate filament family.
   
0.977
LMNA
Lamin A/C; Belongs to the intermediate filament family.
    
0.955
CASP6
Caspase 6; Belongs to the peptidase C14A family.
    
 0.842
GZMB
Granzyme B; Belongs to the peptidase S1 family.
    
 0.820
EMD
Uncharacterized protein.
    
 0.783
LOC105521048
LEM domain-containing protein.
    
 0.783
LOC105500983
Uncharacterized protein.
   
 0.745
BANF1
Barrier-to-autointegration factor.
   
 0.745
ENSCANP00000021992
Uncharacterized protein.
   
 0.745
SUN1
Sad1 and UNC84 domain containing 1.
    
 0.742
Your Current Organism:
Colobus angolensis
NCBI taxonomy Id: 336983
Other names: C. angolensis palliatus, Colobus angolensis palliatus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.