STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPSF4Cleavage and polyadenylation specific factor 4. (269 aa)    
Predicted Functional Partners:
CPSF1
Cleavage and polyadenylation specific factor 1.
   
 0.992
CPSF3
Cleavage and polyadenylation specific factor 3.
   
 0.990
CPSF2
Cleavage and polyadenylation specificity factor subunit 2.
    
 0.990
WDR33
WD repeat domain 33.
   
 0.987
FIP1L1
Factor interacting with PAPOLA and CPSF1.
    
 0.984
SYMPK
Symplekin.
   
 0.978
RBBP6
RB binding protein 6, ubiquitin ligase.
    
 0.977
CSTF2
Cleavage stimulation factor subunit 2.
   
 0.956
CSTF1
Cleavage stimulation factor subunit 1.
   
 0.954
SSU72
SSU72 homolog, RNA polymerase II CTD phosphatase.
   
 0.950
Your Current Organism:
Colobus angolensis
NCBI taxonomy Id: 336983
Other names: C. angolensis palliatus, Colobus angolensis palliatus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.