Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSCANP00000010884 | SMAD3 | ENSCANP00000010884 | ENSCANP00000000895 | Uncharacterized protein. | Mothers against decapentaplegic homolog. | 0.748 |
ENSCANP00000010884 | SMAD7 | ENSCANP00000010884 | ENSCANP00000006477 | Uncharacterized protein. | Mothers against decapentaplegic homolog. | 0.945 |
ENSCANP00000010884 | TGFBR1 | ENSCANP00000010884 | ENSCANP00000029823 | Uncharacterized protein. | Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. | 0.673 |
ENSCANP00000010884 | TGFBR2 | ENSCANP00000010884 | ENSCANP00000004177 | Uncharacterized protein. | TGF-beta receptor type-2; Transmembrane serine/threonine kinase forming with the TGF- beta type I serine/threonine kinase receptor, TGFBR1, the non- promiscuous receptor for the TGF-beta cytokines TGFB1, TGFB2 and TGFB3. Transduces the TGFB1, TGFB2 and TGFB3 signal from the cell surface to the cytoplasm and is thus regulating a plethora of physiological and pathological processes including cell cycle arrest in epithelial and hematopoietic cells, control of mesenchymal cell proliferation and differentiation, wound healing, extracellular matrix production, immunosuppression and carcinoge [...] | 0.661 |
ENSCANP00000012853 | NEDD4L | ENSCANP00000012853 | ENSCANP00000024635 | C2 domain-containing protein. | NEDD4 like E3 ubiquitin protein ligase. | 0.687 |
ENSCANP00000012853 | SMAD3 | ENSCANP00000012853 | ENSCANP00000000895 | C2 domain-containing protein. | Mothers against decapentaplegic homolog. | 0.781 |
ENSCANP00000012853 | SMAD7 | ENSCANP00000012853 | ENSCANP00000006477 | C2 domain-containing protein. | Mothers against decapentaplegic homolog. | 0.975 |
ENSCANP00000012853 | SMURF2 | ENSCANP00000012853 | ENSCANP00000026566 | C2 domain-containing protein. | E3 ubiquitin-protein ligase. | 0.874 |
ENSCANP00000012853 | TGFBR1 | ENSCANP00000012853 | ENSCANP00000029823 | C2 domain-containing protein. | Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. | 0.794 |
ENSCANP00000012853 | TGFBR2 | ENSCANP00000012853 | ENSCANP00000004177 | C2 domain-containing protein. | TGF-beta receptor type-2; Transmembrane serine/threonine kinase forming with the TGF- beta type I serine/threonine kinase receptor, TGFBR1, the non- promiscuous receptor for the TGF-beta cytokines TGFB1, TGFB2 and TGFB3. Transduces the TGFB1, TGFB2 and TGFB3 signal from the cell surface to the cytoplasm and is thus regulating a plethora of physiological and pathological processes including cell cycle arrest in epithelial and hematopoietic cells, control of mesenchymal cell proliferation and differentiation, wound healing, extracellular matrix production, immunosuppression and carcinoge [...] | 0.747 |
NEDD4L | ENSCANP00000012853 | ENSCANP00000024635 | ENSCANP00000012853 | NEDD4 like E3 ubiquitin protein ligase. | C2 domain-containing protein. | 0.687 |
NEDD4L | SMAD3 | ENSCANP00000024635 | ENSCANP00000000895 | NEDD4 like E3 ubiquitin protein ligase. | Mothers against decapentaplegic homolog. | 0.972 |
NEDD4L | SMAD7 | ENSCANP00000024635 | ENSCANP00000006477 | NEDD4 like E3 ubiquitin protein ligase. | Mothers against decapentaplegic homolog. | 0.968 |
NEDD4L | SMURF1 | ENSCANP00000024635 | ENSCANP00000029030 | NEDD4 like E3 ubiquitin protein ligase. | E3 ubiquitin-protein ligase. | 0.687 |
NEDD4L | SMURF2 | ENSCANP00000024635 | ENSCANP00000026566 | NEDD4 like E3 ubiquitin protein ligase. | E3 ubiquitin-protein ligase. | 0.879 |
RNF111 | SMAD3 | ENSCANP00000040349 | ENSCANP00000000895 | Ring finger protein 111. | Mothers against decapentaplegic homolog. | 0.799 |
RNF111 | SMAD7 | ENSCANP00000040349 | ENSCANP00000006477 | Ring finger protein 111. | Mothers against decapentaplegic homolog. | 0.924 |
RNF111 | SMURF2 | ENSCANP00000040349 | ENSCANP00000026566 | Ring finger protein 111. | E3 ubiquitin-protein ligase. | 0.451 |
SMAD3 | ENSCANP00000010884 | ENSCANP00000000895 | ENSCANP00000010884 | Mothers against decapentaplegic homolog. | Uncharacterized protein. | 0.748 |
SMAD3 | ENSCANP00000012853 | ENSCANP00000000895 | ENSCANP00000012853 | Mothers against decapentaplegic homolog. | C2 domain-containing protein. | 0.781 |
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