STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC30A5Solute carrier family 30 member 5. (704 aa)    
Predicted Functional Partners:
SLC30A6
Solute carrier family 30 member 6.
  
 
0.791
TTR
Transthyretin; Thyroid hormone-binding protein. Probably transports thyroxine from the bloodstream to the brain.
   
  
 0.514
TMEM216
Transmembrane protein 216.
      
 0.489
COL3A1
Collagen type III alpha 1 chain.
      
 0.470
SLC39A9
Solute carrier family 39 member 9.
   
 
 0.467
SLC39A7
Solute carrier family 39 member 7.
  
 0.467
ATRN
Attractin.
   
  
 0.460
SLC39A13
Solute carrier family 39 member 13.
   
 0.448
SLC30A9
Solute carrier family 30 member 9.
  
 
 0.448
SLC39A11
Solute carrier family 39 member 11.
   
 0.421
Your Current Organism:
Colobus angolensis
NCBI taxonomy Id: 336983
Other names: C. angolensis palliatus, Colobus angolensis palliatus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.