STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDH19Cadherin 19; Cadherins are calcium-dependent cell adhesion proteins. (772 aa)    
Predicted Functional Partners:
SALL3
Spalt like transcription factor 3.
      
 0.547
KCNJ6
Potassium voltage-gated channel subfamily J member 6.
      
 0.534
KCNJ15
Potassium voltage-gated channel subfamily J member 15.
      
 0.514
RAPGEF2
Rap guanine nucleotide exchange factor 2.
    
 
 0.505
ABCD4
ATP binding cassette subfamily D member 4.
     
 0.500
PDZK1
PDZ domain containing 1.
  
 
   0.461
PLP1
Proteolipid protein 1.
   
  
 0.433
FEM1B
Fem-1 homolog B.
    
 0.400
KIF1A
Kinesin family member 1A; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 
 0.400
Your Current Organism:
Colobus angolensis
NCBI taxonomy Id: 336983
Other names: C. angolensis palliatus, Colobus angolensis palliatus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.