STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHROOM1Shroom family member 1. (761 aa)    
Predicted Functional Partners:
RTL9
Retrotransposon Gag like 9.
  
     0.479
MAMSTR
MEF2 activating motif and SAP domain containing transcriptional regulator.
  
     0.430
ENSCANP00000034872
Uncharacterized protein.
  
     0.423
AFF1
AF4/FMR2 family member 1.
      
 0.422
TEX15
Testis expressed 15, meiosis and synapsis associated.
      
 0.408
NR0B1
Nuclear receptor subfamily 0 group B member 1.
  
   
 0.403
Your Current Organism:
Colobus angolensis
NCBI taxonomy Id: 336983
Other names: C. angolensis palliatus, Colobus angolensis palliatus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.