STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRRM1Serine and arginine repetitive matrix 1. (913 aa)    
Predicted Functional Partners:
UPF3A
UPF3A regulator of nonsense mediated mRNA decay.
    
 0.962
RBM25
RNA binding motif protein 25.
   
 0.951
SRRM2
Serine/arginine repetitive matrix 2.
   
 0.942
RANBP2
RAN binding protein 2.
    
 0.923
UPF2
UPF2 regulator of nonsense mediated mRNA decay.
    
 
 0.913
UPF1
UPF1 RNA helicase and ATPase.
    
 
 0.909
UPF3B
UPF3B regulator of nonsense mediated mRNA decay.
    
 0.893
TCERG1
Transcription elongation regulator 1.
   
 0.881
SRSF1
Uncharacterized protein.
   
 0.868
SF3B1
Splicing factor 3b subunit 1.
   
 
 0.867
Your Current Organism:
Colobus angolensis
NCBI taxonomy Id: 336983
Other names: C. angolensis palliatus, Colobus angolensis palliatus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.