Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ATXN7 | ATXN7L3 | ENSCANP00000007135 | ENSCANP00000011361 | SCA7 domain-containing protein. | Ataxin 7 like 3. | 0.960 |
ATXN7 | ENY2 | ENSCANP00000007135 | ENSCANP00000002157 | SCA7 domain-containing protein. | Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates both histones H2A and H2B. The SAGA complex is recruited to specific gene promoters by activators such as MYC, where it is required for trans [...] | 0.911 |
ATXN7 | ENY2-2 | ENSCANP00000007135 | ENSCANP00000026219 | SCA7 domain-containing protein. | Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates both histones H2A and H2B. The SAGA complex is recruited to specific gene promoters by activators such as MYC, where it is required for trans [...] | 0.911 |
ATXN7 | KAT2A | ENSCANP00000007135 | ENSCANP00000010322 | SCA7 domain-containing protein. | Histone acetyltransferase; Belongs to the acetyltransferase family. GCN5 subfamily. | 0.930 |
ATXN7 | SGF29 | ENSCANP00000007135 | ENSCANP00000031981 | SCA7 domain-containing protein. | SAGA complex associated factor 29. | 0.932 |
ATXN7 | SUPT3H | ENSCANP00000007135 | ENSCANP00000013050 | SCA7 domain-containing protein. | SPT3 homolog, SAGA and STAGA complex component. | 0.948 |
ATXN7 | TADA3 | ENSCANP00000007135 | ENSCANP00000027789 | SCA7 domain-containing protein. | Transcriptional adaptor 3. | 0.965 |
ATXN7 | TAF12 | ENSCANP00000007135 | ENSCANP00000030245 | SCA7 domain-containing protein. | TATA-box binding protein associated factor 12. | 0.959 |
ATXN7 | TAF5L | ENSCANP00000007135 | ENSCANP00000031196 | SCA7 domain-containing protein. | TATA-box binding protein associated factor 5 like. | 0.925 |
ATXN7 | USP22 | ENSCANP00000007135 | ENSCANP00000020731 | SCA7 domain-containing protein. | Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family. | 0.890 |
ATXN7L3 | ATXN7 | ENSCANP00000011361 | ENSCANP00000007135 | Ataxin 7 like 3. | SCA7 domain-containing protein. | 0.960 |
ATXN7L3 | ENY2 | ENSCANP00000011361 | ENSCANP00000002157 | Ataxin 7 like 3. | Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates both histones H2A and H2B. The SAGA complex is recruited to specific gene promoters by activators such as MYC, where it is required for trans [...] | 0.963 |
ATXN7L3 | ENY2-2 | ENSCANP00000011361 | ENSCANP00000026219 | Ataxin 7 like 3. | Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates both histones H2A and H2B. The SAGA complex is recruited to specific gene promoters by activators such as MYC, where it is required for trans [...] | 0.963 |
ATXN7L3 | KAT2A | ENSCANP00000011361 | ENSCANP00000010322 | Ataxin 7 like 3. | Histone acetyltransferase; Belongs to the acetyltransferase family. GCN5 subfamily. | 0.949 |
ATXN7L3 | SGF29 | ENSCANP00000011361 | ENSCANP00000031981 | Ataxin 7 like 3. | SAGA complex associated factor 29. | 0.956 |
ATXN7L3 | SUPT3H | ENSCANP00000011361 | ENSCANP00000013050 | Ataxin 7 like 3. | SPT3 homolog, SAGA and STAGA complex component. | 0.970 |
ATXN7L3 | TADA3 | ENSCANP00000011361 | ENSCANP00000027789 | Ataxin 7 like 3. | Transcriptional adaptor 3. | 0.981 |
ATXN7L3 | TAF12 | ENSCANP00000011361 | ENSCANP00000030245 | Ataxin 7 like 3. | TATA-box binding protein associated factor 12. | 0.976 |
ATXN7L3 | TAF5L | ENSCANP00000011361 | ENSCANP00000031196 | Ataxin 7 like 3. | TATA-box binding protein associated factor 5 like. | 0.950 |
ATXN7L3 | USP22 | ENSCANP00000011361 | ENSCANP00000020731 | Ataxin 7 like 3. | Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family. | 0.946 |
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