STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COL13A1Collagen type XIII alpha 1 chain. (717 aa)    
Predicted Functional Partners:
ITGA1
Integrin subunit alpha 1; Belongs to the integrin alpha chain family.
     
 0.547
PLOD3
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3.
   
 0.543
RAB3IL1
RAB3A interacting protein like 1.
    
 
 0.530
PLOD1
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1.
   
 0.522
PLOD2
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2.
   
 0.522
P4HA1
Prolyl 4-hydroxylase subunit alpha 1.
    
 0.522
KCNS1
Potassium voltage-gated channel modifier subfamily S member 1; Belongs to the potassium channel family.
      
 0.514
ITGB1
Integrin beta; Belongs to the integrin beta chain family.
    
 0.501
P4HB
Protein disulfide-isomerase.
    
  0.480
P3H2
Prolyl 3-hydroxylase 2.
    
  0.477
Your Current Organism:
Colobus angolensis
NCBI taxonomy Id: 336983
Other names: C. angolensis palliatus, Colobus angolensis palliatus
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.