STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBM39RNA binding motif protein 39. (524 aa)    
Predicted Functional Partners:
RBM25
RNA binding motif protein 25.
   
0.914
DDX5
DEAD-box helicase 5; Belongs to the DEAD box helicase family.
   
 0.897
SON
SON DNA binding protein.
   
  0.894
RBM5
RNA binding motif protein 5.
   
 0.875
SRSF11
Serine and arginine rich splicing factor 11.
   
 
 0.856
ENSCANP00000039402
Uncharacterized protein.
   
 
 0.856
SF3B1
Splicing factor 3b subunit 1.
   
 
 0.842
CDC5L
Cell division cycle 5 like.
   
 
 0.836
U2AF2
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
   
 
0.827
ENSCANP00000040326
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
   
 
0.827
Your Current Organism:
Colobus angolensis
NCBI taxonomy Id: 336983
Other names: C. angolensis palliatus, Colobus angolensis palliatus
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.