STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GATAD2BGATA zinc finger domain containing 2B. (593 aa)    
Predicted Functional Partners:
MTA2
Metastasis associated 1 family member 2.
   
 0.957
CHD4
Uncharacterized protein.
   
 0.954
MTA3
Metastasis associated 1 family member 3.
   
 0.951
MTA1
Metastasis associated 1.
   
 0.951
CHD3
Chromodomain helicase DNA binding protein 3.
   
 0.950
RBBP7
RB binding protein 7, chromatin remodeling factor.
   
 0.945
HDAC2
Histone deacetylase 2; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes.
   
 0.942
MBD2
Methyl-CpG binding domain protein 2.
   
 0.928
MBD3
Methyl-CpG binding domain protein 3.
   
 0.907
CHD5
Chromodomain helicase DNA binding protein 5.
   
 0.895
Your Current Organism:
Colobus angolensis
NCBI taxonomy Id: 336983
Other names: C. angolensis palliatus, Colobus angolensis palliatus
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