Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSCANP00000001003 | LOC105517192 | ENSCANP00000001003 | ENSCANP00000022509 | Ribosomal_L18_c domain-containing protein. | Uncharacterized protein. | 0.459 |
ENSCANP00000001003 | NOP58 | ENSCANP00000001003 | ENSCANP00000002803 | Ribosomal_L18_c domain-containing protein. | NOP58 ribonucleoprotein. | 0.795 |
ENSCANP00000001003 | TP53 | ENSCANP00000001003 | ENSCANP00000028904 | Ribosomal_L18_c domain-containing protein. | Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression; Belongs to the p53 family. | 0.440 |
ENSCANP00000006242 | LOC105517192 | ENSCANP00000006242 | ENSCANP00000022509 | Uncharacterized protein. | Uncharacterized protein. | 0.459 |
ENSCANP00000006242 | NOP58 | ENSCANP00000006242 | ENSCANP00000002803 | Uncharacterized protein. | NOP58 ribonucleoprotein. | 0.795 |
ENSCANP00000006242 | TP53 | ENSCANP00000006242 | ENSCANP00000028904 | Uncharacterized protein. | Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression; Belongs to the p53 family. | 0.440 |
HJURP | LOC105517192 | ENSCANP00000032800 | ENSCANP00000022509 | Holliday junction recognition protein. | Uncharacterized protein. | 0.525 |
HJURP | RUVBL1 | ENSCANP00000032800 | ENSCANP00000039040 | Holliday junction recognition protein. | RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. | 0.677 |
LOC105517192 | ENSCANP00000001003 | ENSCANP00000022509 | ENSCANP00000001003 | Uncharacterized protein. | Ribosomal_L18_c domain-containing protein. | 0.459 |
LOC105517192 | ENSCANP00000006242 | ENSCANP00000022509 | ENSCANP00000006242 | Uncharacterized protein. | Uncharacterized protein. | 0.459 |
LOC105517192 | HJURP | ENSCANP00000022509 | ENSCANP00000032800 | Uncharacterized protein. | Holliday junction recognition protein. | 0.525 |
LOC105517192 | MET | ENSCANP00000022509 | ENSCANP00000023025 | Uncharacterized protein. | MET proto-oncogene, receptor tyrosine kinase. | 0.483 |
LOC105517192 | MST1R | ENSCANP00000022509 | ENSCANP00000040344 | Uncharacterized protein. | Macrophage stimulating 1 receptor. | 0.483 |
LOC105517192 | NCL | ENSCANP00000022509 | ENSCANP00000026666 | Uncharacterized protein. | Nucleolin. | 0.827 |
LOC105517192 | NOP58 | ENSCANP00000022509 | ENSCANP00000002803 | Uncharacterized protein. | NOP58 ribonucleoprotein. | 0.505 |
LOC105517192 | NPM3 | ENSCANP00000022509 | ENSCANP00000006016 | Uncharacterized protein. | Nucleophosmin/nucleoplasmin 3. | 0.504 |
LOC105517192 | RUVBL1 | ENSCANP00000022509 | ENSCANP00000039040 | Uncharacterized protein. | RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. | 0.498 |
LOC105517192 | TP53 | ENSCANP00000022509 | ENSCANP00000028904 | Uncharacterized protein. | Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression; Belongs to the p53 family. | 0.598 |
MET | LOC105517192 | ENSCANP00000023025 | ENSCANP00000022509 | MET proto-oncogene, receptor tyrosine kinase. | Uncharacterized protein. | 0.483 |
MET | MST1R | ENSCANP00000023025 | ENSCANP00000040344 | MET proto-oncogene, receptor tyrosine kinase. | Macrophage stimulating 1 receptor. | 0.743 |
page 1 of 2