Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DDX20 | ENSCANP00000019248 | ENSCANP00000036406 | ENSCANP00000019248 | DEAD-box helicase 20. | Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family. | 0.869 |
DDX20 | ENSCANP00000019589 | ENSCANP00000036406 | ENSCANP00000019589 | DEAD-box helicase 20. | Uncharacterized protein. | 0.934 |
DDX20 | ENSCANP00000022809 | ENSCANP00000036406 | ENSCANP00000022809 | DEAD-box helicase 20. | Uncharacterized protein. | 0.987 |
DDX20 | GEMIN2 | ENSCANP00000036406 | ENSCANP00000023766 | DEAD-box helicase 20. | Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family. | 0.934 |
DDX20 | GEMIN5 | ENSCANP00000036406 | ENSCANP00000017714 | DEAD-box helicase 20. | Gem nuclear organelle associated protein 5. | 0.991 |
DDX20 | GEMIN6 | ENSCANP00000036406 | ENSCANP00000023600 | DEAD-box helicase 20. | Gem nuclear organelle associated protein 6. | 0.903 |
DDX20 | GEMIN8 | ENSCANP00000036406 | ENSCANP00000015686 | DEAD-box helicase 20. | Gem nuclear organelle associated protein 8. | 0.934 |
DDX20 | LOC105517690 | ENSCANP00000036406 | ENSCANP00000019751 | DEAD-box helicase 20. | Tudor domain-containing protein. | 0.956 |
DDX20 | LOC105524159 | ENSCANP00000036406 | ENSCANP00000029487 | DEAD-box helicase 20. | Tudor domain-containing protein. | 0.956 |
DDX20 | STRAP | ENSCANP00000036406 | ENSCANP00000018205 | DEAD-box helicase 20. | Serine/threonine kinase receptor associated protein. | 0.986 |
ENSCANP00000019248 | DDX20 | ENSCANP00000019248 | ENSCANP00000036406 | Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family. | DEAD-box helicase 20. | 0.869 |
ENSCANP00000019248 | ENSCANP00000019589 | ENSCANP00000019248 | ENSCANP00000019589 | Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family. | Uncharacterized protein. | 0.752 |
ENSCANP00000019248 | ENSCANP00000022809 | ENSCANP00000019248 | ENSCANP00000022809 | Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family. | Uncharacterized protein. | 0.819 |
ENSCANP00000019248 | GEMIN5 | ENSCANP00000019248 | ENSCANP00000017714 | Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family. | Gem nuclear organelle associated protein 5. | 0.845 |
ENSCANP00000019248 | GEMIN6 | ENSCANP00000019248 | ENSCANP00000023600 | Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family. | Gem nuclear organelle associated protein 6. | 0.789 |
ENSCANP00000019248 | GEMIN8 | ENSCANP00000019248 | ENSCANP00000015686 | Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family. | Gem nuclear organelle associated protein 8. | 0.752 |
ENSCANP00000019248 | LOC105517690 | ENSCANP00000019248 | ENSCANP00000019751 | Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family. | Tudor domain-containing protein. | 0.908 |
ENSCANP00000019248 | LOC105524159 | ENSCANP00000019248 | ENSCANP00000029487 | Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family. | Tudor domain-containing protein. | 0.908 |
ENSCANP00000019248 | STRAP | ENSCANP00000019248 | ENSCANP00000018205 | Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family. | Serine/threonine kinase receptor associated protein. | 0.637 |
ENSCANP00000019589 | DDX20 | ENSCANP00000019589 | ENSCANP00000036406 | Uncharacterized protein. | DEAD-box helicase 20. | 0.934 |
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