STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADAMTS18ADAM metallopeptidase with thrombospondin type 1 motif 18. (942 aa)    
Predicted Functional Partners:
SALL4
Spalt like transcription factor 4.
   
  
 0.679
SCUBE2
Signal peptide, CUB domain and EGF like domain containing 2.
   
 0.673
TET2
Tet methylcytosine dioxygenase 2.
      
 0.663
GPR84
G protein-coupled receptor 84.
      
 0.662
USH1C
USH1 protein network component harmonin.
      
 0.662
ARID4B
AT-rich interaction domain 4B.
      
 0.662
HIVEP3
Human immunodeficiency virus type I enhancer binding protein 3.
      
 0.661
KIF1B
Kinesin family member 1B; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
      
 0.658
IRX3
Iroquois homeobox 3.
      
 0.640
USH2A
Usherin.
      
 0.601
Your Current Organism:
Colobus angolensis
NCBI taxonomy Id: 336983
Other names: C. angolensis palliatus, Colobus angolensis palliatus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.