STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TPRX1Tetrapeptide repeat homeobox 1. (482 aa)    
Predicted Functional Partners:
CATSPERD
Cation channel sperm associated auxiliary subunit delta.
   
 0.907
CATSPERB
Cation channel sperm associated auxiliary subunit beta.
    
 0.900
CATSPER1
Cation channel sperm associated 1.
    
 0.895
CATSPER3
Cation channel sperm associated 3.
    
 0.764
DUXB
Double homeobox B.
  
 
 
0.617
CATSPERZ
Catsper channel auxiliary subunit zeta.
    
 
 0.575
CATSPERE
Catsper channel auxiliary subunit epsilon.
    
 0.567
SYNJ2BP
Synaptojanin 2 binding protein.
    
 0.567
EFCAB9
EF-hand calcium binding domain 9.
    
 
 0.553
TMEM249
Transmembrane protein 249.
    
   0.545
Your Current Organism:
Colobus angolensis
NCBI taxonomy Id: 336983
Other names: C. angolensis palliatus, Colobus angolensis palliatus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.