PCDH20 protein (Colobus angolensis) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

PCDH20

Uncharacterized protein. (952 aa)

Predicted Functional Partners:

CENPA

0.663

FRMD6

0.488

LIX1L

0.439

LIX1

0.439

BRICD5

0.418

FAM102B

0.406

EGFL7

0.403

Your Current Organism:

Colobus angolensis

NCBI taxonomy Id: 336983
Other names: C. angolensis palliatus, Colobus angolensis palliatus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BRICD5	PCDH20	ENSCANP00000023298	ENSCANP00000033569	BRICHOS domain containing 5.	Uncharacterized protein.	0.418
CENPA	PCDH20	ENSCANP00000021078	ENSCANP00000033569	Centromere protein A.	Uncharacterized protein.	0.663
EGFL7	PCDH20	ENSCANP00000018883	ENSCANP00000033569	EGF like domain multiple 7.	Uncharacterized protein.	0.403
FAM102B	PCDH20	ENSCANP00000013751	ENSCANP00000033569	Family with sequence similarity 102 member B.	Uncharacterized protein.	0.406
FRMD6	PCDH20	ENSCANP00000031172	ENSCANP00000033569	FERM domain containing 6.	Uncharacterized protein.	0.488
LIX1	PCDH20	ENSCANP00000009499	ENSCANP00000033569	Limb and CNS expressed 1.	Uncharacterized protein.	0.439
LIX1L	PCDH20	ENSCANP00000006418	ENSCANP00000033569	Limb and CNS expressed 1 like.	Uncharacterized protein.	0.439
PCDH20	BRICD5	ENSCANP00000033569	ENSCANP00000023298	Uncharacterized protein.	BRICHOS domain containing 5.	0.418
PCDH20	CENPA	ENSCANP00000033569	ENSCANP00000021078	Uncharacterized protein.	Centromere protein A.	0.663
PCDH20	EGFL7	ENSCANP00000033569	ENSCANP00000018883	Uncharacterized protein.	EGF like domain multiple 7.	0.403
PCDH20	FAM102B	ENSCANP00000033569	ENSCANP00000013751	Uncharacterized protein.	Family with sequence similarity 102 member B.	0.406
PCDH20	FRMD6	ENSCANP00000033569	ENSCANP00000031172	Uncharacterized protein.	FERM domain containing 6.	0.488
PCDH20	LIX1	ENSCANP00000033569	ENSCANP00000009499	Uncharacterized protein.	Limb and CNS expressed 1.	0.439
PCDH20	LIX1L	ENSCANP00000033569	ENSCANP00000006418	Uncharacterized protein.	Limb and CNS expressed 1 like.	0.439