STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIM42Tripartite motif containing 42. (723 aa)    
Predicted Functional Partners:
TRIM69
Tripartite motif containing 69.
     
 0.598
TRIM41
Tripartite motif containing 41.
     
 0.549
TRIM23
Tripartite motif containing 23.
    
 0.527
TRIM4
Tripartite motif containing 4.
      
 0.515
C10orf120
Chromosome 10 open reading frame 120.
   
  
 0.430
SAXO1
Stabilizer of axonemal microtubules 1.
   
 0.419
SPRED3
Sprouty related EVH1 domain containing 3.
      
 0.412
LYPD4
LY6/PLAUR domain containing 4.
   
  
 0.405
C5orf47
Chromosome 5 open reading frame 47.
   
  
 0.402
Your Current Organism:
Colobus angolensis
NCBI taxonomy Id: 336983
Other names: C. angolensis palliatus, Colobus angolensis palliatus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.