STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NT96_00440Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (112 aa)    
Predicted Functional Partners:
NT96_04815
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.753
NT96_00435
5'-methylthioadenosine nucleosidase; Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S-adenosylhomocysteine (SAH/AdoHcy) to adenine and the corresponding thioribose, 5'- methylthioribose and S-ribosylhomocysteine, respectively. Belongs to the PNP/UDP phosphorylase family. MtnN subfamily.
  
  
 0.742
NT96_00455
RNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.644
NT96_00430
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.639
recD2
ATPase AAA; DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity; Belongs to the RecD family. RecD-like subfamily.
       0.638
NT96_02365
Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.638
NT96_05015
Ribonucleotide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NrdI family.
  
     0.606
NT96_00450
Lysophospholipase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.595
NT96_02060
Peptidoglycan-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.570
NT96_01700
MerR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.545
Your Current Organism:
Oenococcus kitaharae
NCBI taxonomy Id: 336988
Other names: DSM 17330, JCM 13282, NRIC 0645, O. kitaharae, Oenococcus kitaharae Endo and Okada 2006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.