STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OEG00428.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (153 aa)    
Predicted Functional Partners:
OEG00429.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.773
OEG00427.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.572
OEG00426.1
RNA polymerase subunit sigma; Expressed in late exponential phase; controls the expression of genes coding cell surface proteins involved in chemotaxis, flagellar assembly, and autolysis; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family.
       0.512
OEG00422.1
Chemotaxis protein CheW; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.482
OEG00423.1
CheY-P-specific phosphatase CheC; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.482
cheD
Chemotaxis protein CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.
       0.482
OEG00425.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.482
cheB
Chemotaxis response regulator protein-glutamate methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
       0.470
OEG00421.1
Chemotaxis protein CheA; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.470
OEG00419.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.459
Your Current Organism:
Vulcanibacillus modesticaldus
NCBI taxonomy Id: 337097
Other names: Bacillus sp. BR, DSM 14931, JCM 12998, V. modesticaldus, strain Br
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