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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OEF99412.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (470 aa)    
Predicted Functional Partners:
OEF99411.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.689
BHF71_00855
ISL3 family transposase; Incomplete; too short partial abutting assembly gap; missing stop; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.664
OEF96915.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
  0.643
OEF98082.1
Dipeptidase PepV; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.524
OEF99413.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.474
plsY
Acyl-phosphate glycerol 3-phosphate acyltransferase; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.
       0.447
OEF99415.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.447
OEF99410.1
Peptidase M28; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.440
OEF99409.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.429
Your Current Organism:
Vulcanibacillus modesticaldus
NCBI taxonomy Id: 337097
Other names: Bacillus sp. BR, DSM 14931, JCM 12998, V. modesticaldus, strain Br
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