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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OEF99940.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (461 aa)    
Predicted Functional Partners:
OEF99939.1
DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.995
OEF99425.1
DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.960
OEF99228.1
DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.956
OEG00091.1
DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.953
OEF99662.1
DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.952
OEF97254.1
DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.949
prs
Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.
    
 0.884
OEG00260.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
0.862
OEF99704.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 0.847
OEG00412.1
Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.845
Your Current Organism:
Vulcanibacillus modesticaldus
NCBI taxonomy Id: 337097
Other names: Bacillus sp. BR, DSM 14931, JCM 12998, V. modesticaldus, strain Br
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