STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OEF98821.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (271 aa)    
Predicted Functional Partners:
OEF98822.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  0.984
OEF98820.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.898
OEF98971.1
Bacteriocin ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.816
OEG00171.1
AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.813
OEF99925.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.677
OEF99486.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 0.677
OEF95546.1
Histone deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.596
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 
 0.560
OEG00450.1
Zinc protease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase M16 family.
   
 0.519
OEF99396.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
  0.495
Your Current Organism:
Vulcanibacillus modesticaldus
NCBI taxonomy Id: 337097
Other names: Bacillus sp. BR, DSM 14931, JCM 12998, V. modesticaldus, strain Br
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.