Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
KTR9_0106 | KTR9_1231 | Signal transduction histidine kinase. | Hypothetical protein. | 0.471 |
KTR9_0106 | KTR9_2064 | Signal transduction histidine kinase. | Histidine kinase-like protein, GAF superfamily. | 0.690 |
KTR9_0106 | KTR9_2610 | Signal transduction histidine kinase. | Signal transduction histidine kinase. | 0.718 |
KTR9_0106 | KTR9_3280 | Signal transduction histidine kinase. | Signal transduction histidine kinase. | 0.763 |
KTR9_0106 | KTR9_3512 | Signal transduction histidine kinase. | Signal transduction histidine kinase. | 0.780 |
KTR9_1230 | KTR9_1231 | Hypothetical protein. | Hypothetical protein. | 0.472 |
KTR9_1231 | KTR9_0106 | Hypothetical protein. | Signal transduction histidine kinase. | 0.471 |
KTR9_1231 | KTR9_1230 | Hypothetical protein. | Hypothetical protein. | 0.472 |
KTR9_1231 | KTR9_1630 | Hypothetical protein. | Two-component histidine kinase. | 0.628 |
KTR9_1231 | KTR9_1674 | Hypothetical protein. | Signal transduction histidine kinase. | 0.471 |
KTR9_1231 | KTR9_1876 | Hypothetical protein. | Signal transduction histidine kinase. | 0.471 |
KTR9_1231 | KTR9_2064 | Hypothetical protein. | Histidine kinase-like protein, GAF superfamily. | 0.628 |
KTR9_1231 | KTR9_2610 | Hypothetical protein. | Signal transduction histidine kinase. | 0.471 |
KTR9_1231 | KTR9_3280 | Hypothetical protein. | Signal transduction histidine kinase. | 0.471 |
KTR9_1231 | KTR9_3512 | Hypothetical protein. | Signal transduction histidine kinase. | 0.471 |
KTR9_1231 | KTR9_4182 | Hypothetical protein. | Glyoxalase/bleomycin resistance protein/dioxygenase. | 0.481 |
KTR9_1630 | KTR9_1231 | Two-component histidine kinase. | Hypothetical protein. | 0.628 |
KTR9_1630 | KTR9_3512 | Two-component histidine kinase. | Signal transduction histidine kinase. | 0.424 |
KTR9_1674 | KTR9_1231 | Signal transduction histidine kinase. | Hypothetical protein. | 0.471 |
KTR9_1674 | KTR9_2610 | Signal transduction histidine kinase. | Signal transduction histidine kinase. | 0.495 |
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