Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
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textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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Score
KTR9_1663DNA-directed RNA polymerase specialized sigma subunit, sigma24 -like protein; Belongs to the sigma-70 factor family. ECF subfamily. (195 aa)    
Predicted Functional Partners:
KTR9_1664
Hypothetical protein.
 
 
 
 0.981
rpoC
DNA-directed RNA polymerase, beta' subunit/160 kD subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
 
 
 0.907
rpoB
DNA-directed RNA polymerase, beta subunit/140 kD subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.895
KTR9_4747
DNA-directed RNA polymerase specialized sigma subunit, sigma24 -like protein; Belongs to the sigma-70 factor family. ECF subfamily.
  
   
 0.842
rpoA
DNA-directed RNA polymerase, alpha subunit/40 kD subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.795
KTR9_1662
Hypothetical protein.
       0.723
KTR9_3554
DNA-directed RNA polymerase specialized sigma subunit, sigma24-like protein; Belongs to the sigma-70 factor family. ECF subfamily.
  
   
 0.681
KTR9_1794
DNA-directed RNA polymerase specialized sigma subunit, sigma24 -like protein; Belongs to the sigma-70 factor family. ECF subfamily.
  
     0.664
KTR9_2321
Cell wall-associated hydrolases (invasion- associated proteins).
  
  
 0.609
KTR9_3553
Anti-sigma factor.
 
 
 0.605
Your Current Organism:
Gordonia sp. KTR9
NCBI taxonomy Id: 337191
Other names: G. sp. KTR9
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