STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KTR9_2835TRAP-type mannitol/chloroaromatic compound transport system, small permease component. (187 aa)    
Predicted Functional Partners:
KTR9_2836
TRAP-type C4-dicarboxylate transport system, large permease component.
    0.952
KTR9_2834
TRAP-type C4-dicarboxylate transport system periplasmic component.
 
    0.927
KTR9_0689
TRAP-type C4-dicarboxylate transport system, periplasmic component.
 
    0.716
KTR9_0693
TRAP-type C4-dicarboxylate transport system, large permease component.
    0.668
KTR9_4417
ABC-type Fe3+ transport system, periplasmic component.
  
     0.634
KTR9_4419
ABC-type Fe3+ transport system, permease component.
 
     0.564
KTR9_4422
ABC-type Fe3+ transport system, periplasmic component.
  
     0.537
KTR9_4690
ABC-type Fe3+ transport system, periplasmic component.
  
     0.536
Your Current Organism:
Gordonia sp. KTR9
NCBI taxonomy Id: 337191
Other names: G. sp. KTR9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.