STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KTR9_3207Adenylosuccinate lyase. (398 aa)    
Predicted Functional Partners:
KTR9_3205
Protocatechuate 3,4-dioxygenase beta subunit.
 
 
 0.998
KTR9_3206
Protocatechuate 3,4-dioxygenase beta subunit.
 
 
 0.998
KTR9_3208
Gamma-carboxymuconolactone decarboxylase family protein.
 
 
 0.997
KTR9_3790
Gamma-carboxymuconolactone decarboxylase family protein.
  
 
 0.931
purA
Adenylosuccinate synthase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
 
 0.900
purC
Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase; Belongs to the SAICAR synthetase family.
  
 0.899
purH
AICAR transformylase / IMP cyclohydrolase.
  
 0.886
KTR9_1925
MaoC domain-containing protein dehydratase.
  
  
 0.874
purF
Glutamine phosphoribosylpyrophosphate amidotransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine.
  
 
 0.808
purD
Phosphoribosylamine-glycine ligase; Belongs to the GARS family.
  
 
 0.792
Your Current Organism:
Gordonia sp. KTR9
NCBI taxonomy Id: 337191
Other names: G. sp. KTR9
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