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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KTR9_3209Putative Co/Zn/Cd cation transporter; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. (305 aa)    
Predicted Functional Partners:
lepA
Membrane GTPase LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.
  
    0.826
KTR9_3210
Zn-dependent oligopeptidase.
  
    0.815
ldh
Malate dehydrogenase / lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family.
  
    0.508
mdh
Malate dehydrogenase / lactate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family.
  
    0.508
KTR9_3212
Putative hydrolase of the alpha/beta-hydrolase fold family.
       0.415
KTR9_1170
Hypothetical protein.
     
 0.405
cmk
Cytidylate kinase.
  
    0.405
Your Current Organism:
Gordonia sp. KTR9
NCBI taxonomy Id: 337191
Other names: G. sp. KTR9
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