STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KTR9_4516Short-chain dehydorgenase/reductase. (255 aa)    
Predicted Functional Partners:
KTR9_2231
Short-chain dehydorgenase/reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
 0.731
KTR9_1925
MaoC domain-containing protein dehydratase.
  
 0.720
KTR9_1551
Short-chain dehydorgenase/reductase.
  
     0.719
KTR9_1015
Short-chain alcohol dehydrogenase of unknown specificity; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
  
 0.715
KTR9_4029
Short-chain dehydorgenase/reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 0.637
KTR9_3725
Short-chain dehydorgenase/reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
 0.607
KTR9_4515
Aryl- alcohol dehydrogenase-like predicted oxidoreductase.
  
  
 0.604
KTR9_3845
Hypothetical protein.
   
 0.594
KTR9_0415
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein; cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase.
  
 0.576
KTR9_4479
Short-chain dehydorgenase/reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
  
 0.549
Your Current Organism:
Gordonia sp. KTR9
NCBI taxonomy Id: 337191
Other names: G. sp. KTR9
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