STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_00163300Glycoside hydrolase. (212 aa)    
Predicted Functional Partners:
CKAN_01952700
Endoglucanase.
    
  0.693
CKAN_01774700
Galactose mutarotase-like domain-containing protein.
    
 0.693
CKAN_00469100
Endoglucanase 8-like protein.
    
  0.693
CKAN_01478400
Endoglucanase.
    
  0.693
CKAN_00617100
Glucan endo-1,3-beta-glucosidase 4 isoform X1; Belongs to the glycosyl hydrolase 17 family.
    
  0.691
CKAN_01507800
Glycoside hydrolase; Belongs to the glycosyl hydrolase 3 family.
  
  
 
0.685
CKAN_02031400
Testis-expressed sequence 10 protein isoform X2.
    
 0.639
CKAN_00732700
Endoglucanase.
   
  0.594
CKAN_00466600
Endoglucanase.
   
  0.594
CKAN_00031700
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.
   
 0.574
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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