STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_00189900RWD domain-containing protein 1. (252 aa)    
Predicted Functional Partners:
CKAN_00660300
Developmentally-regulated G-protein 2.
   
 
 0.979
CKAN_01891600
Developmentally-regulated G-protein 3.
   
 
 0.962
CKAN_02541400
Uncharacterized protein.
    
 
 0.833
CKAN_02541300
eIF-2-alpha kinase activator GCN1 isoform X2.
    
 
 0.833
CKAN_01980800
Pre-rRNA-processing protein ESF1.
   
   0.714
CKAN_02030500
Protein BCCIP homolog; Belongs to the BCP1 family.
   
    0.713
CKAN_00444300
Putative ribosome biogenesis protein RLP24.
   
    0.713
CKAN_01149600
Translation machinery-associated protein 22.
   
    0.713
CKAN_02488300
Zinc finger CCCH domain-containing protein 11-like protein.
   
 
 0.689
CKAN_00536000
Zinc finger CCCH domain-containing protein 11 isoform X2.
   
 
 0.689
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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