STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_00197800Beta-galactosidase. (847 aa)    
Predicted Functional Partners:
CKAN_02513100
Beta galactosidase small chain/ domain-containing protein; Belongs to the glycosyl hydrolase 2 family.
  
 0.891
CKAN_01891100
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
  
 
 0.885
CKAN_02611100
Beta-hexosaminidase.
  
 
 0.872
CKAN_00611200
Beta-galactosidase.
  
  
0.871
CKAN_00777300
Phosphotransferase.
     
 0.839
CKAN_00371900
Xylose isomerase.
  
 
 0.814
CKAN_01134200
Xylose isomerase.
  
 
 0.814
CKAN_00202500
Beta-hexosaminidase.
  
 
 0.771
CKAN_00619200
Glycoside hydrolase family 20.
  
 
 0.771
CKAN_00618700
Beta-hexosaminidase.
  
 
 0.771
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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