STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_00199100Aspartate/glutamate/uridylate kinase. (921 aa)    
Predicted Functional Partners:
CKAN_02299200
Homoserine kinase.
 
 0.980
CKAN_02299600
Homoserine kinase.
 
 0.980
CKAN_01585800
Aspartate/glutamate/uridylate kinase.
 
0.978
CKAN_02299300
Homoserine kinase.
  
 0.974
CKAN_00008100
Acetolactate synthase small subunit 2, chloroplastic-like protein.
  
 
 0.973
CKAN_02110300
Acetolactate synthase small subunit 2, chloroplastic.
  
 
 0.973
CKAN_02203800
Semialdehyde dehydrogenase.
  
 0.970
CKAN_00771400
Threonine dehydratase.
  
 
 0.944
CKAN_00689400
Cystathionine gamma-synthase 1, chloroplastic.
 
 
 0.943
CKAN_02305700
Cystathionine beta-lyase, chloroplastic-like protein isoform X1.
 
 
 0.943
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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