STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_00346800Extra-large guanine nucleotide-binding protein 3-like protein. (900 aa)    
Predicted Functional Partners:
CKAN_02506400
Guanine nucleotide-binding protein subunit beta-2.
   
 0.955
CKAN_00543800
Guanine nucleotide-binding protein subunit beta-2.
   
 0.955
CKAN_01254700
AUGMIN subunit 6-like protein.
    
 0.921
CKAN_02632800
AUGMIN subunit 6-like protein.
    
 0.921
CKAN_01830300
Protein CHUP1, chloroplastic-like protein isoform X1.
    
 0.889
CKAN_02574000
Protein CHUP1, chloroplastic-like protein.
    
 0.889
CKAN_01636300
Ubiquitin carboxyl-terminal hydrolase.
    
 0.889
CKAN_00635600
Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein isoform X1.
   
 0.863
CKAN_00383300
Protein kinase domain-containing protein.
   
 0.758
CKAN_02575700
AAA+ ATPase domain-containing protein.
   
 0.758
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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