Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CKAN_00224000 | CKAN_00282700 | A0A3S3N723 | A0A443N7N3 | Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH7. | Small nuclear ribonucleoprotein-associated protein B. | 0.964 |
CKAN_00224000 | CKAN_00445000 | A0A3S3N723 | A0A3S3M2S6 | Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH7. | Cwf21 domain-containing protein. | 0.974 |
CKAN_00224000 | CKAN_00930500 | A0A3S3N723 | A0A3S3MIL0 | Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH7. | Pre-mRNA-processing factor 17 isoform X1. | 0.986 |
CKAN_00224000 | CKAN_00976200 | A0A3S3N723 | A0A443NRE8 | Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH7. | Pre-mRNA-splicing factor syf2-like protein. | 0.991 |
CKAN_00224000 | CKAN_01321200 | A0A3S3N723 | A0A3S3QHC1 | Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH7. | WD40 repeat. | 0.986 |
CKAN_00224000 | CKAN_01488900 | A0A3S3N723 | A0A3S3QJD4 | Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH7. | Pre-mRNA-splicing factor SLU7. | 0.999 |
CKAN_00224000 | CKAN_01500800 | A0A3S3N723 | A0A3S3QL30 | Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH7. | Serine/arginine repetitive matrix protein 1-like protein. | 0.960 |
CKAN_00224000 | CKAN_02342800 | A0A3S3N723 | A0A443PTQ3 | Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH7. | Putative small nuclear ribonucleoprotein F. | 0.965 |
CKAN_00224000 | CKAN_02509400 | A0A3S3N723 | A0A443PYA4 | Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH7. | Pre-mRNA-splicing factor CWC25. | 0.993 |
CKAN_00224000 | CKAN_02514600 | A0A3S3N723 | A0A443PYG8 | Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH7. | Replication protein A subunit isoform X1. | 0.993 |
CKAN_00282700 | CKAN_00224000 | A0A443N7N3 | A0A3S3N723 | Small nuclear ribonucleoprotein-associated protein B. | Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH7. | 0.964 |
CKAN_00282700 | CKAN_00445000 | A0A443N7N3 | A0A3S3M2S6 | Small nuclear ribonucleoprotein-associated protein B. | Cwf21 domain-containing protein. | 0.958 |
CKAN_00282700 | CKAN_00930500 | A0A443N7N3 | A0A3S3MIL0 | Small nuclear ribonucleoprotein-associated protein B. | Pre-mRNA-processing factor 17 isoform X1. | 0.932 |
CKAN_00282700 | CKAN_00976200 | A0A443N7N3 | A0A443NRE8 | Small nuclear ribonucleoprotein-associated protein B. | Pre-mRNA-splicing factor syf2-like protein. | 0.936 |
CKAN_00282700 | CKAN_01321200 | A0A443N7N3 | A0A3S3QHC1 | Small nuclear ribonucleoprotein-associated protein B. | WD40 repeat. | 0.932 |
CKAN_00282700 | CKAN_01488900 | A0A443N7N3 | A0A3S3QJD4 | Small nuclear ribonucleoprotein-associated protein B. | Pre-mRNA-splicing factor SLU7. | 0.915 |
CKAN_00282700 | CKAN_01500800 | A0A443N7N3 | A0A3S3QL30 | Small nuclear ribonucleoprotein-associated protein B. | Serine/arginine repetitive matrix protein 1-like protein. | 0.762 |
CKAN_00282700 | CKAN_02342800 | A0A443N7N3 | A0A443PTQ3 | Small nuclear ribonucleoprotein-associated protein B. | Putative small nuclear ribonucleoprotein F. | 0.999 |
CKAN_00282700 | CKAN_02509400 | A0A443N7N3 | A0A443PYA4 | Small nuclear ribonucleoprotein-associated protein B. | Pre-mRNA-splicing factor CWC25. | 0.924 |
CKAN_00282700 | CKAN_02514600 | A0A443N7N3 | A0A443PYG8 | Small nuclear ribonucleoprotein-associated protein B. | Replication protein A subunit isoform X1. | 0.930 |
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