STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_00661000PM H+-ATPase R. (72 aa)    
Predicted Functional Partners:
CKAN_01114100
Soluble inorganic pyrophosphatase 1 isoform X1.
     
 0.683
CKAN_02602600
ATP synthase gamma chain, chloroplastic.
   
 0.661
CKAN_01893100
ATP synthase delta chain, chloroplastic.
   
  0.657
CKAN_00316600
Adenylate kinase isoenzyme 6 homolog; Broad-specificity nucleoside monophosphate (NMP) kinase that catalyzes the reversible transfer of the terminal phosphate group between nucleoside triphosphates and monophosphates. Has also ATPase activity; Belongs to the adenylate kinase family. AK6 subfamily.
     
 0.625
CKAN_02737700
ATP synthase subunit beta, chloroplastic-like protein.
   
 0.577
CKAN_02771900
Uncharacterized protein.
   
 0.577
CKAN_02723400
ATP synthase subunit beta, chloroplastic-like protein.
   
 0.577
CKAN_00359300
Cation-transporting P-type ATPase.
   
 0.569
CKAN_01039300
Nickel/cobalt transporter, high-affinity.
   
 0.569
CKAN_01066300
Copper-transporting ATPase RAN1.
   
 0.569
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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