Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CKAN_00249100 | CKAN_00288200 | A0A3S3LZA3 | A0A3S3LZX6 | Nuclear pore complex protein NUP58. | Nuclear pore complex protein NUP54. | 0.999 |
CKAN_00249100 | CKAN_00307700 | A0A3S3LZA3 | A0A443N886 | Nuclear pore complex protein NUP58. | Nuclear pore protein. | 0.996 |
CKAN_00249100 | CKAN_00771700 | A0A3S3LZA3 | A0A3S3M8V0 | Nuclear pore complex protein NUP58. | Protein GLE1. | 0.980 |
CKAN_00249100 | CKAN_01737100 | A0A3S3LZA3 | A0A443PC79 | Nuclear pore complex protein NUP58. | Putative transcription factor. | 0.982 |
CKAN_00249100 | CKAN_02010400 | A0A3S3LZA3 | A0A3S3QWU6 | Nuclear pore complex protein NUP58. | Transcription factor. | 0.982 |
CKAN_00249100 | CKAN_02033300 | A0A3S3LZA3 | A0A3S3NA48 | Nuclear pore complex protein NUP58. | DEAD-box ATP-dependent RNA helicase 38. | 0.520 |
CKAN_00249100 | CKAN_02242000 | A0A3S3LZA3 | A0A443PR30 | Nuclear pore complex protein NUP58. | Protein SEH1 isoform X1; Belongs to the WD repeat SEC13 family. | 0.993 |
CKAN_00249100 | CKAN_02521800 | A0A3S3LZA3 | A0A3S3N4M8 | Nuclear pore complex protein NUP58. | Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). | 0.991 |
CKAN_00249100 | CKAN_02533600 | A0A3S3LZA3 | A0A3S3PR10 | Nuclear pore complex protein NUP58. | Nuclear pore complex protein NUP155. | 0.993 |
CKAN_00249100 | CKAN_02651400 | A0A3S3LZA3 | A0A443Q256 | Nuclear pore complex protein NUP58. | Zinc finger family protein. | 0.982 |
CKAN_00288200 | CKAN_00249100 | A0A3S3LZX6 | A0A3S3LZA3 | Nuclear pore complex protein NUP54. | Nuclear pore complex protein NUP58. | 0.999 |
CKAN_00288200 | CKAN_00307700 | A0A3S3LZX6 | A0A443N886 | Nuclear pore complex protein NUP54. | Nuclear pore protein. | 0.996 |
CKAN_00288200 | CKAN_00771700 | A0A3S3LZX6 | A0A3S3M8V0 | Nuclear pore complex protein NUP54. | Protein GLE1. | 0.978 |
CKAN_00288200 | CKAN_01737100 | A0A3S3LZX6 | A0A443PC79 | Nuclear pore complex protein NUP54. | Putative transcription factor. | 0.979 |
CKAN_00288200 | CKAN_02010400 | A0A3S3LZX6 | A0A3S3QWU6 | Nuclear pore complex protein NUP54. | Transcription factor. | 0.979 |
CKAN_00288200 | CKAN_02033300 | A0A3S3LZX6 | A0A3S3NA48 | Nuclear pore complex protein NUP54. | DEAD-box ATP-dependent RNA helicase 38. | 0.499 |
CKAN_00288200 | CKAN_02242000 | A0A3S3LZX6 | A0A443PR30 | Nuclear pore complex protein NUP54. | Protein SEH1 isoform X1; Belongs to the WD repeat SEC13 family. | 0.990 |
CKAN_00288200 | CKAN_02521800 | A0A3S3LZX6 | A0A3S3N4M8 | Nuclear pore complex protein NUP54. | Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). | 0.992 |
CKAN_00288200 | CKAN_02533600 | A0A3S3LZX6 | A0A3S3PR10 | Nuclear pore complex protein NUP54. | Nuclear pore complex protein NUP155. | 0.994 |
CKAN_00288200 | CKAN_02651400 | A0A3S3LZX6 | A0A443Q256 | Nuclear pore complex protein NUP54. | Zinc finger family protein. | 0.979 |
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