Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CKAN_00037500 | CKAN_00054800 | A0A3S3M935 | A0A443N1F1 | Terpene synthase 1. | Geranylgeranyl pyrophosphate synthase 1; Belongs to the FPP/GGPP synthase family. | 0.419 |
CKAN_00037500 | CKAN_00258700 | A0A3S3M935 | A0A3S3MIC7 | Terpene synthase 1. | Geranylgeranyl pyrophosphate synthase 1; Belongs to the FPP/GGPP synthase family. | 0.419 |
CKAN_00037500 | CKAN_00704100 | A0A3S3M935 | A0A3S3NZW3 | Terpene synthase 1. | Alkyl transferase; Belongs to the UPP synthase family. | 0.514 |
CKAN_00037500 | CKAN_01137200 | A0A3S3M935 | A0A3S3MMH1 | Terpene synthase 1. | Squalene synthase. | 0.526 |
CKAN_00037500 | CKAN_01215200 | A0A3S3M935 | A0A443NXY1 | Terpene synthase 1. | Farnesyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family. | 0.487 |
CKAN_00037500 | CKAN_01230400 | A0A3S3M935 | A0A3S3MH10 | Terpene synthase 1. | Geranylgeranyl pyrophosphate synthase, chloroplastic/chromoplastic-like protein; Belongs to the FPP/GGPP synthase family. | 0.552 |
CKAN_00037500 | CKAN_01890200 | A0A3S3M935 | A0A443PGE0 | Terpene synthase 1. | Alkyl transferase; Belongs to the UPP synthase family. | 0.518 |
CKAN_00037500 | CKAN_02433600 | A0A3S3M935 | A0A3S3NV35 | Terpene synthase 1. | Fanesyl diphosphate synthase 1; Belongs to the FPP/GGPP synthase family. | 0.487 |
CKAN_00037500 | CKAN_02504500 | A0A3S3M935 | A0A443PY52 | Terpene synthase 1. | Geranylgeranyl diphosphate synthase 3; Belongs to the FPP/GGPP synthase family. | 0.419 |
CKAN_00054800 | CKAN_00037500 | A0A443N1F1 | A0A3S3M935 | Geranylgeranyl pyrophosphate synthase 1; Belongs to the FPP/GGPP synthase family. | Terpene synthase 1. | 0.419 |
CKAN_00054800 | CKAN_00704100 | A0A443N1F1 | A0A3S3NZW3 | Geranylgeranyl pyrophosphate synthase 1; Belongs to the FPP/GGPP synthase family. | Alkyl transferase; Belongs to the UPP synthase family. | 0.879 |
CKAN_00054800 | CKAN_01137200 | A0A443N1F1 | A0A3S3MMH1 | Geranylgeranyl pyrophosphate synthase 1; Belongs to the FPP/GGPP synthase family. | Squalene synthase. | 0.928 |
CKAN_00054800 | CKAN_01215200 | A0A443N1F1 | A0A443NXY1 | Geranylgeranyl pyrophosphate synthase 1; Belongs to the FPP/GGPP synthase family. | Farnesyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family. | 0.842 |
CKAN_00054800 | CKAN_01230400 | A0A443N1F1 | A0A3S3MH10 | Geranylgeranyl pyrophosphate synthase 1; Belongs to the FPP/GGPP synthase family. | Geranylgeranyl pyrophosphate synthase, chloroplastic/chromoplastic-like protein; Belongs to the FPP/GGPP synthase family. | 0.841 |
CKAN_00054800 | CKAN_01890200 | A0A443N1F1 | A0A443PGE0 | Geranylgeranyl pyrophosphate synthase 1; Belongs to the FPP/GGPP synthase family. | Alkyl transferase; Belongs to the UPP synthase family. | 0.900 |
CKAN_00054800 | CKAN_02433600 | A0A443N1F1 | A0A3S3NV35 | Geranylgeranyl pyrophosphate synthase 1; Belongs to the FPP/GGPP synthase family. | Fanesyl diphosphate synthase 1; Belongs to the FPP/GGPP synthase family. | 0.842 |
CKAN_00258700 | CKAN_00037500 | A0A3S3MIC7 | A0A3S3M935 | Geranylgeranyl pyrophosphate synthase 1; Belongs to the FPP/GGPP synthase family. | Terpene synthase 1. | 0.419 |
CKAN_00258700 | CKAN_00704100 | A0A3S3MIC7 | A0A3S3NZW3 | Geranylgeranyl pyrophosphate synthase 1; Belongs to the FPP/GGPP synthase family. | Alkyl transferase; Belongs to the UPP synthase family. | 0.879 |
CKAN_00258700 | CKAN_01137200 | A0A3S3MIC7 | A0A3S3MMH1 | Geranylgeranyl pyrophosphate synthase 1; Belongs to the FPP/GGPP synthase family. | Squalene synthase. | 0.928 |
CKAN_00258700 | CKAN_01215200 | A0A3S3MIC7 | A0A443NXY1 | Geranylgeranyl pyrophosphate synthase 1; Belongs to the FPP/GGPP synthase family. | Farnesyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family. | 0.842 |
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