Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CKAN_00385900 | CKAN_00494700 | A0A3S3M990 | A0A443NDA4 | DUF1068 domain-containing protein. | U3 small nucleolar RNA-associated protein 14 A. | 0.985 |
CKAN_00385900 | CKAN_00565500 | A0A3S3M990 | A0A3S3M4Y2 | DUF1068 domain-containing protein. | Nucleolar protein 14. | 0.986 |
CKAN_00385900 | CKAN_00645200 | A0A3S3M990 | A0A443NHD1 | DUF1068 domain-containing protein. | U3 small nucleolar RNA-associated protein 4. | 0.984 |
CKAN_00385900 | CKAN_01182300 | A0A3S3M990 | A0A3S3MVA8 | DUF1068 domain-containing protein. | WD40 repeat. | 0.973 |
CKAN_00385900 | CKAN_01637100 | A0A3S3M990 | A0A3S3PBV2 | DUF1068 domain-containing protein. | BP28. | 0.990 |
CKAN_00385900 | CKAN_01771900 | A0A3S3M990 | A0A3S3QQ66 | DUF1068 domain-containing protein. | WD40 repeat. | 0.976 |
CKAN_00385900 | CKAN_01772300 | A0A3S3M990 | A0A3S3NXQ0 | DUF1068 domain-containing protein. | WD40 repeat. | 0.976 |
CKAN_00385900 | CKAN_01849200 | A0A3S3M990 | A0A3S3MTE8 | DUF1068 domain-containing protein. | Protein SLOW WALKER 1. | 0.983 |
CKAN_00385900 | CKAN_02508600 | A0A3S3M990 | A0A3S3R5L6 | DUF1068 domain-containing protein. | Nucleolar protein 6 isoform X1. | 0.982 |
CKAN_00385900 | CKAN_02545100 | A0A3S3M990 | A0A3S3NPD7 | DUF1068 domain-containing protein. | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | 0.970 |
CKAN_00494700 | CKAN_00385900 | A0A443NDA4 | A0A3S3M990 | U3 small nucleolar RNA-associated protein 14 A. | DUF1068 domain-containing protein. | 0.985 |
CKAN_00494700 | CKAN_00565500 | A0A443NDA4 | A0A3S3M4Y2 | U3 small nucleolar RNA-associated protein 14 A. | Nucleolar protein 14. | 0.999 |
CKAN_00494700 | CKAN_00645200 | A0A443NDA4 | A0A443NHD1 | U3 small nucleolar RNA-associated protein 14 A. | U3 small nucleolar RNA-associated protein 4. | 0.999 |
CKAN_00494700 | CKAN_01182300 | A0A443NDA4 | A0A3S3MVA8 | U3 small nucleolar RNA-associated protein 14 A. | WD40 repeat. | 0.999 |
CKAN_00494700 | CKAN_01637100 | A0A443NDA4 | A0A3S3PBV2 | U3 small nucleolar RNA-associated protein 14 A. | BP28. | 0.997 |
CKAN_00494700 | CKAN_01771900 | A0A443NDA4 | A0A3S3QQ66 | U3 small nucleolar RNA-associated protein 14 A. | WD40 repeat. | 0.995 |
CKAN_00494700 | CKAN_01772300 | A0A443NDA4 | A0A3S3NXQ0 | U3 small nucleolar RNA-associated protein 14 A. | WD40 repeat. | 0.995 |
CKAN_00494700 | CKAN_01849200 | A0A443NDA4 | A0A3S3MTE8 | U3 small nucleolar RNA-associated protein 14 A. | Protein SLOW WALKER 1. | 0.996 |
CKAN_00494700 | CKAN_02508600 | A0A443NDA4 | A0A3S3R5L6 | U3 small nucleolar RNA-associated protein 14 A. | Nucleolar protein 6 isoform X1. | 0.998 |
CKAN_00494700 | CKAN_02545100 | A0A443NDA4 | A0A3S3NPD7 | U3 small nucleolar RNA-associated protein 14 A. | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | 0.999 |
page 1 of 6