STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_00513400Polyamine oxidase 1. (535 aa)    
Predicted Functional Partners:
CKAN_02586400
Spermine synthase; Belongs to the spermidine/spermine synthase family.
    
 0.938
CKAN_00661300
Putative polyamine oxidase 5.
  
  
 0.936
CKAN_00555000
Spermidine synthase 1-like protein; Belongs to the spermidine/spermine synthase family.
    
 0.931
CKAN_00267300
Amine oxidase.
   
 
 0.926
CKAN_02197100
Aldehyde dehydrogenase NADP-dependent; Belongs to the aldehyde dehydrogenase family.
    
 0.905
CKAN_00709900
Putative polyamine oxidase 4 isoform X1.
  
  
0.900
CKAN_01782400
Flavin amine oxidase.
  
  
0.894
CKAN_01782200
Flavin amine oxidase.
  
  
0.893
CKAN_00073600
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.892
CKAN_01123100
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.892
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.