Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CKAN_00025100 | CKAN_00031700 | A0A443N0N3 | A0A3S3M8Z5 | WD repeat-containing protein 74 isoform X1. | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | 0.996 |
CKAN_00025100 | CKAN_00307500 | A0A443N0N3 | A0A3S3MTT5 | WD repeat-containing protein 74 isoform X1. | Ribosomal protein L1. | 0.987 |
CKAN_00025100 | CKAN_00444300 | A0A443N0N3 | A0A3S3PYP6 | WD repeat-containing protein 74 isoform X1. | Putative ribosome biogenesis protein RLP24. | 0.993 |
CKAN_00025100 | CKAN_00517000 | A0A443N0N3 | A0A3S3MBG5 | WD repeat-containing protein 74 isoform X1. | Ribosomal RNA large subunit methyltransferase E. | 0.990 |
CKAN_00025100 | CKAN_00992000 | A0A443N0N3 | A0A443NRY1 | WD repeat-containing protein 74 isoform X1. | Ribosome biogenesis protein NOP53-like protein. | 0.857 |
CKAN_00025100 | CKAN_00998200 | A0A443N0N3 | A0A443NS09 | WD repeat-containing protein 74 isoform X1. | RNA helicase. | 0.936 |
CKAN_00025100 | CKAN_01195800 | A0A443N0N3 | A0A3S3MNI9 | WD repeat-containing protein 74 isoform X1. | Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family. | 0.996 |
CKAN_00025100 | CKAN_02186900 | A0A443N0N3 | A0A443PPE8 | WD repeat-containing protein 74 isoform X1. | Nucleolar complex protein 2. | 0.994 |
CKAN_00025100 | CKAN_02444100 | A0A443N0N3 | A0A3S4PUV8 | WD repeat-containing protein 74 isoform X1. | Putative nucleolar protein 5-1. | 0.955 |
CKAN_00025100 | CKAN_02530500 | A0A443N0N3 | A0A3S3NIS7 | WD repeat-containing protein 74 isoform X1. | Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. | 0.999 |
CKAN_00031700 | CKAN_00025100 | A0A3S3M8Z5 | A0A443N0N3 | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | WD repeat-containing protein 74 isoform X1. | 0.996 |
CKAN_00031700 | CKAN_00307500 | A0A3S3M8Z5 | A0A3S3MTT5 | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | Ribosomal protein L1. | 0.991 |
CKAN_00031700 | CKAN_00444300 | A0A3S3M8Z5 | A0A3S3PYP6 | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | Putative ribosome biogenesis protein RLP24. | 0.999 |
CKAN_00031700 | CKAN_00517000 | A0A3S3M8Z5 | A0A3S3MBG5 | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | Ribosomal RNA large subunit methyltransferase E. | 0.990 |
CKAN_00031700 | CKAN_00992000 | A0A3S3M8Z5 | A0A443NRY1 | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | Ribosome biogenesis protein NOP53-like protein. | 0.990 |
CKAN_00031700 | CKAN_00998200 | A0A3S3M8Z5 | A0A443NS09 | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | RNA helicase. | 0.989 |
CKAN_00031700 | CKAN_01195800 | A0A3S3M8Z5 | A0A3S3MNI9 | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family. | 0.999 |
CKAN_00031700 | CKAN_02186900 | A0A3S3M8Z5 | A0A443PPE8 | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | Nucleolar complex protein 2. | 0.999 |
CKAN_00031700 | CKAN_02444100 | A0A3S3M8Z5 | A0A3S4PUV8 | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | Putative nucleolar protein 5-1. | 0.993 |
CKAN_00031700 | CKAN_02530500 | A0A3S3M8Z5 | A0A3S3NIS7 | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. | 0.999 |
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