Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CKAN_00511200 | CKAN_01017700 | A0A3S3MHQ3 | A0A3S3MDA6 | NEDD8-activating enzyme E1 catalytic subunit. | Zinc finger protein. | 0.636 |
CKAN_00511200 | CKAN_02298400 | A0A3S3MHQ3 | A0A3S3N796 | NEDD8-activating enzyme E1 catalytic subunit. | Zinc finger, RING-type. | 0.636 |
CKAN_00511200 | CKAN_02405000 | A0A3S3MHQ3 | A0A443PVE6 | NEDD8-activating enzyme E1 catalytic subunit. | Putative E3 ubiquitin-protein ligase LUL4. | 0.636 |
CKAN_01017700 | CKAN_00511200 | A0A3S3MDA6 | A0A3S3MHQ3 | Zinc finger protein. | NEDD8-activating enzyme E1 catalytic subunit. | 0.636 |
CKAN_01017700 | CKAN_01810500 | A0A3S3MDA6 | A0A3S4PDQ3 | Zinc finger protein. | Conserved oligomeric Golgi complex subunit 5. | 0.416 |
CKAN_01017700 | CKAN_02298400 | A0A3S3MDA6 | A0A3S3N796 | Zinc finger protein. | Zinc finger, RING-type. | 0.807 |
CKAN_01017700 | CKAN_02405000 | A0A3S3MDA6 | A0A443PVE6 | Zinc finger protein. | Putative E3 ubiquitin-protein ligase LUL4. | 0.807 |
CKAN_01810500 | CKAN_01017700 | A0A3S4PDQ3 | A0A3S3MDA6 | Conserved oligomeric Golgi complex subunit 5. | Zinc finger protein. | 0.416 |
CKAN_02298400 | CKAN_00511200 | A0A3S3N796 | A0A3S3MHQ3 | Zinc finger, RING-type. | NEDD8-activating enzyme E1 catalytic subunit. | 0.636 |
CKAN_02298400 | CKAN_01017700 | A0A3S3N796 | A0A3S3MDA6 | Zinc finger, RING-type. | Zinc finger protein. | 0.807 |
CKAN_02405000 | CKAN_00511200 | A0A443PVE6 | A0A3S3MHQ3 | Putative E3 ubiquitin-protein ligase LUL4. | NEDD8-activating enzyme E1 catalytic subunit. | 0.636 |
CKAN_02405000 | CKAN_01017700 | A0A443PVE6 | A0A3S3MDA6 | Putative E3 ubiquitin-protein ligase LUL4. | Zinc finger protein. | 0.807 |