Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CKAN_00780300 | CKAN_00933500 | A0A3S3N1W7 | A0A3S3MQP3 | 3-dehydroquinate synthase, chloroplastic-like protein isoform X1. | 3-phosphoshikimate 1-carboxyvinyltransferase; Belongs to the EPSP synthase family. | 0.928 |
CKAN_00780300 | CKAN_01053700 | A0A3S3N1W7 | A0A3S3MDW6 | 3-dehydroquinate synthase, chloroplastic-like protein isoform X1. | Cationic amino acid transporter 1-like protein. | 0.612 |
CKAN_00780300 | CKAN_01648400 | A0A3S3N1W7 | A0A443P9X4 | 3-dehydroquinate synthase, chloroplastic-like protein isoform X1. | 3-phosphoshikimate 1-carboxyvinyltransferase; Belongs to the EPSP synthase family. | 0.928 |
CKAN_00780300 | CKAN_02289400 | A0A3S3N1W7 | A0A3S3NES7 | 3-dehydroquinate synthase, chloroplastic-like protein isoform X1. | Dehydroquinase class I. | 0.918 |
CKAN_00780300 | CKAN_02289500 | A0A3S3N1W7 | A0A3S3N748 | 3-dehydroquinate synthase, chloroplastic-like protein isoform X1. | Bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic. | 0.968 |
CKAN_00780300 | CKAN_02400700 | A0A3S3N1W7 | A0A443PVA5 | 3-dehydroquinate synthase, chloroplastic-like protein isoform X1. | Dehydroquinase class I. | 0.918 |
CKAN_00933500 | CKAN_00780300 | A0A3S3MQP3 | A0A3S3N1W7 | 3-phosphoshikimate 1-carboxyvinyltransferase; Belongs to the EPSP synthase family. | 3-dehydroquinate synthase, chloroplastic-like protein isoform X1. | 0.928 |
CKAN_00933500 | CKAN_01053700 | A0A3S3MQP3 | A0A3S3MDW6 | 3-phosphoshikimate 1-carboxyvinyltransferase; Belongs to the EPSP synthase family. | Cationic amino acid transporter 1-like protein. | 0.612 |
CKAN_00933500 | CKAN_02289500 | A0A3S3MQP3 | A0A3S3N748 | 3-phosphoshikimate 1-carboxyvinyltransferase; Belongs to the EPSP synthase family. | Bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic. | 0.672 |
CKAN_01053700 | CKAN_00780300 | A0A3S3MDW6 | A0A3S3N1W7 | Cationic amino acid transporter 1-like protein. | 3-dehydroquinate synthase, chloroplastic-like protein isoform X1. | 0.612 |
CKAN_01053700 | CKAN_00933500 | A0A3S3MDW6 | A0A3S3MQP3 | Cationic amino acid transporter 1-like protein. | 3-phosphoshikimate 1-carboxyvinyltransferase; Belongs to the EPSP synthase family. | 0.612 |
CKAN_01053700 | CKAN_01202100 | A0A3S3MDW6 | A0A3S3P586 | Cationic amino acid transporter 1-like protein. | Translocon at the outer membrane of chloroplasts 64. | 0.613 |
CKAN_01053700 | CKAN_01202500 | A0A3S3MDW6 | A0A3S3QE91 | Cationic amino acid transporter 1-like protein. | Outer envelope protein 64, chloroplastic-like protein. | 0.613 |
CKAN_01053700 | CKAN_01285900 | A0A3S3MDW6 | A0A3S3MWY2 | Cationic amino acid transporter 1-like protein. | Outer envelope protein 64, mitochondrial. | 0.613 |
CKAN_01053700 | CKAN_01364100 | A0A3S3MDW6 | A0A3S3MYD9 | Cationic amino acid transporter 1-like protein. | Enolpyruvate transferase domain-containing protein. | 0.612 |
CKAN_01053700 | CKAN_01648400 | A0A3S3MDW6 | A0A443P9X4 | Cationic amino acid transporter 1-like protein. | 3-phosphoshikimate 1-carboxyvinyltransferase; Belongs to the EPSP synthase family. | 0.612 |
CKAN_01053700 | CKAN_02289400 | A0A3S3MDW6 | A0A3S3NES7 | Cationic amino acid transporter 1-like protein. | Dehydroquinase class I. | 0.612 |
CKAN_01053700 | CKAN_02289500 | A0A3S3MDW6 | A0A3S3N748 | Cationic amino acid transporter 1-like protein. | Bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic. | 0.612 |
CKAN_01053700 | CKAN_02400700 | A0A3S3MDW6 | A0A443PVA5 | Cationic amino acid transporter 1-like protein. | Dehydroquinase class I. | 0.612 |
CKAN_01202100 | CKAN_01053700 | A0A3S3P586 | A0A3S3MDW6 | Translocon at the outer membrane of chloroplasts 64. | Cationic amino acid transporter 1-like protein. | 0.613 |
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